dynamo.vf.rank_acceleration_genes

dynamo.vf.rank_acceleration_genes(adata, akey='acceleration', prefix_store='rank', **kwargs)

Rank genes based on their absolute, positive, negative accelerations for each cell group.

Parameters

• adata (AnnData) – AnnData object that contains the reconstructed vector field function in the uns attribute.

• group (str or None (default: None)) – The cell group that speed ranking will be grouped-by.

• akey (str (default: 'acceleration')) – The acceleration key.

Returns

adata – AnnData object that is updated with the ‘rank_acceleration’ information in the .uns.

Return type

AnnData